GSVIVT01019889001


Description : 10.7 cell wall.modification Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Containing a conserved root hair-specific cis-element RHE. Expressed specifically in root hair cell. expansin A7 (EXPA7)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01019889001
Cluster HCCA cluster: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g14660 Os01g0249100 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g06050 Os03g0156000 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g06060 Os03g0156300 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g31480 Os03g0428700 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os10g30330 Os10g0439100 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
MA_35592g0020 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
MA_474624g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
MA_61945g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 73 159
IPR007117 Expansin_CBD 171 248
No external refs found!