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Description : nucleoporin of nuclear pore complex *(NUP1/NUP136) & original description: none
Gene families : OG0002028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002028_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00164270 | evm_27.TU.AmTr_v1... | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06113 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g31899 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene49704.t1 | Aspi01Gene49704 | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07760 | No alias | nuclear lamina CRWN-interacting protein *(KAKU4) &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g14237 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G044000.1 | Ceric.07G044000 | not classified & original description: pacid=50627215... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.08G016500.1 | Ceric.08G016500 | not classified & original description: pacid=50638572... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z123400.1 | Ceric.1Z123400 | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g15117 | No alias | nuclear lamina CRWN-interacting protein *(KAKU4) &... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g05781 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g49204 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01034601001 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_18080 | No alias | NUP1/NUP136 nucleoporin of nuclear pore complex | 0.04 | OrthoFinder output from all 47 species | |
| Len_g19191 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g28383 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g30747 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g32864 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14234 | No alias | nuclear lamina CRWN-interacting protein *(KAKU4) &... | 0.06 | OrthoFinder output from all 47 species | |
| MA_87384g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g05990.1 | No alias | NUP1/NUP136 nucleoporin of nuclear pore complex | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g14916 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g43950 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g28862 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10463 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g13816 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0043.g012850 | No alias | not classified & original description: CDS=3-2681 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g13887 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g19952 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g006390.2.1 | Solyc11g006390 | NUP1/NUP136 nucleoporin of nuclear pore complex | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g41786 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g06136 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e005928_P001 | Zm00001e005928 | NUP1/NUP136 nucleoporin of nuclear pore complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| BP | GO:0000723 | telomere maintenance | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004417 | hydroxyethylthiazole kinase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
| BP | GO:0006772 | thiamine metabolic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032200 | telomere organization | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034308 | primary alcohol metabolic process | IEP | HCCA |
| BP | GO:0034309 | primary alcohol biosynthetic process | IEP | HCCA |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |