1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g26937

Ehy_g26937


Description : component *(FES1) of FRI-C transcription effector complex & original description: none


Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g26937

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00086540 evm_27.TU.AmTr_v1... Zinc finger CCCH domain-containing protein 38... 0.03 OrthoFinder output from all 47 species
AMTR_s00154p00087040 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G18640 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.04 OrthoFinder output from all 47 species
Adi_g020080 No alias component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Adi_g051624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086845 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Ala_g14556 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Ala_g33431 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Ala_g38718 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Als_g21455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32464 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Aob_g22679 No alias component *(FES1) of FRI-C transcription effector... 0.06 OrthoFinder output from all 47 species
Aob_g28684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27511 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Aop_g31626 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Aspi01Gene22257.t1 Aspi01Gene22257 component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Aspi01Gene71346.t1 Aspi01Gene71346 component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Azfi_s0327.g065262 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Cba_g12381 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Cba_g23169 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ceric.09G003600.1 Ceric.09G003600 component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Ceric.12G018000.1 Ceric.12G018000 component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Ceric.20G066500.1 Ceric.20G066500 component *(FES1) of FRI-C transcription effector... 0.08 OrthoFinder output from all 47 species
Ceric.20G084000.1 Ceric.20G084000 component *(FES1) of FRI-C transcription effector... 0.07 OrthoFinder output from all 47 species
Ceric.29G050700.1 Ceric.29G050700 component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Cre01.g003450 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g06929 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Dac_g20324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39403 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Dcu_g07178 No alias component *(FES1) of FRI-C transcription effector... 0.06 OrthoFinder output from all 47 species
GSVIVT01008114001 No alias Zinc finger CCCH domain-containing protein 38... 0.06 OrthoFinder output from all 47 species
GSVIVT01010035001 ACCD RNA biosynthesis.transcriptional activation.C3H zinc... 0.07 OrthoFinder output from all 47 species
Gb_00875 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Gb_19122 No alias C3H zinc finger transcription factor 0.09 OrthoFinder output from all 47 species
Gb_26302 No alias C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os05g41790.1 LOC_Os05g41790 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Len_g20647 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Lfl_g05738 No alias component *(FES1) of FRI-C transcription effector... 0.06 OrthoFinder output from all 47 species
Lfl_g29094 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
MA_111475g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_321233g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8408g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g05400.1 No alias Zinc finger CCCH domain-containing protein 55 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Msp_g15688 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Msp_g19470 No alias component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Nbi_g04479 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Ore_g08246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25353 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Ore_g30501 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Ore_g37073 No alias component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Pir_g18853 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Pir_g41479 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Pir_g61674 No alias component *(FES1) of FRI-C transcription effector... 0.06 OrthoFinder output from all 47 species
Pnu_g26023 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ppi_g08786 No alias component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Ppi_g11003 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000565 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Sam_g30142 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Sam_g39875 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Solyc03g006350.3.1 FES1, Solyc03g006350 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc04g064800.4.1 Solyc04g064800 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g17866 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Spa_g41981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10851 No alias component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Tin_g13648 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Tin_g20286 No alias component *(FES1) of FRI-C transcription effector... 0.09 OrthoFinder output from all 47 species
Tin_g26553 No alias component *(FES1) of FRI-C transcription effector... 0.06 OrthoFinder output from all 47 species
Zm00001e032035_P001 FES1, Zm00001e032035 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e040314_P001 Zm00001e040314 C3H zinc finger transcription factor 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004417 hydroxyethylthiazole kinase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000061 Surp 232 282
No external refs found!