GSVIVT01019173001


Description : 27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2


Gene families : OG_01_0001467 (Gene family) Phylogenetic Tree(s): OG0001467_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01019173001
Cluster HCCA cluster: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
ATCG00170 RPOC2 DNA-directed RNA polymerase family protein 0.03 Gene family
LOC_Os04g16830 No alias 27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2 0.04 Gene family
Solyc01g016520.1.1 Solyc01g016520.1 No description available 0.03 Gene family
Solyc01g017510.1.1 Solyc01g017510.1 27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2 0.03 Gene family
Solyc04g049730.1.1 Solyc04g049730.1 27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2 0.02 Gene family
Solyc06g074600.1.1 Solyc06g074600.1 27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2 0.04 Gene family
Solyc08g028910.1.1 Solyc08g028910.1 27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2 0.02 Gene family
Solyc08g028920.2.1 Solyc08g028920.2 27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2 0.01 Gene family
Solyc10g031550.1.1 Solyc10g031550.1 27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2 0.02 Gene family
Solyc11g007260.1.1 Solyc11g007260.1 No description available 0.03 Gene family
Solyc12g096910.1.1 Solyc12g096910.1 27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA InterProScan
BP GO:0006351 transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007081 RNA_pol_Rpb1_5 5 229
No external refs found!