GSVIVT01018977001


Description : 17.3.1.1.2 hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4 Encodes a 22&#945 hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate. DWARF 4 (DWF4)


Gene families : OG_01_0000009 (Gene family) Phylogenetic Tree(s): OG0000009_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01018977001
Cluster HCCA cluster: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AT4G15300 CYP702A2 cytochrome P450, family 702, subfamily A, polypeptide 2 0.02 Gene family
GSVIVT01032837001 No alias 17.3.1.1.3 hormone... 0.04 Gene family
LOC_Os03g45619 Os03g0658800 26.10 misc.cytochrome P450 encodes a protein with... 0.03 Gene family
LOC_Os04g48170 Os04g0570000 26.10 misc.cytochrome P450 encodes a protein with... 0.02 Gene family
LOC_Os09g21260 Os09g0380300 26.10 misc.cytochrome P450 member of CYP716A "cytochrome... 0.02 Gene family
LOC_Os11g18570 Os11g0289700 26.10 misc.cytochrome P450 encodes a protein with... 0.02 Gene family
MA_107159g0010 No alias 17.6.1.4 hormone... 0.02 Gene family
MA_72115g0010 No alias 17.3.1.1.2 hormone... 0.01 Gene family
Smo157387 PACid_15411470 No description available 0.01 Gene family
Smo402287 PACid_15402825 26.10 misc.cytochrome P450 member of CYP716A "cytochrome... 0.03 Gene family
Smo81507 PACid_15408913 No description available 0.01 Gene family
Zm00001d002629 GRMZM2G096086 26.10 misc.cytochrome P450 encodes a protein with... 0.02 Gene family
Zm00001d026083 GRMZM2G702529 26.10 misc.cytochrome P450 encodes a protein with... 0.04 Gene family
Zm00001d039453 GRMZM2G143235 No description available 0.04 Gene family
Zm00001d047830 GRMZM2G089803 17.6.1.4 hormone... 0.02 Gene family
Zm00001d048819 GRMZM2G161169 26.10 misc.cytochrome P450 member of CYP716A "cytochrome... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan
MF GO:0020037 heme binding IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001128 Cyt_P450 34 465
No external refs found!