GSVIVT01018951001


Description : 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo. MONOPOLE (MNP)


Gene families : OG_01_0000059 (Gene family) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01018951001
Cluster HCCA cluster: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AT3G20750 GATA29 GATA transcription factor 29 0.02 Gene family
AT4G16141 No alias GATA type zinc finger transcription factor family protein 0.02 Gene family
AT4G26150 GATA22, CGA1, GNL cytokinin-responsive gata factor 1 0.03 Gene family
LOC_Os01g47360 Os01g0662800 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.05 Gene family
LOC_Os02g43150 Os02g0645600 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
LOC_Os05g50270 Os05g0578900 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
LOC_Os12g42970 Os12g0624900 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
MA_10434815g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
MA_92522g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Smo69510 PACid_15417968 No description available 0.02 Gene family
Solyc01g100220.3.1 Solyc01g100220.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Solyc02g085190.2.1 Solyc02g085190.2 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
Solyc03g033660.3.1 Solyc03g033660.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.08 Gene family
Zm00001d009668 GRMZM2G397616 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.05 Gene family
Zm00001d011771 GRMZM2G138967 No description available 0.03 Gene family
Zm00001d017409 GRMZM2G140669 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Zm00001d034751 GRMZM2G114775 No description available 0.06 Gene family
Zm00001d039113 GRMZM2G325850 No description available 0.05 Gene family
Zm00001d043969 GRMZM2G123909 No description available 0.04 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000679 Znf_GATA 113 147
No external refs found!