AMTR_s00340p00012500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00340.2

Description : COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana


Gene families : OG_01_0006318 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006318_tree ,
OG_02_0007106 (LandPlants) Phylogenetic Tree(s): OG_02_0007106_tree ,
OG_03_0007203 (SeedPlants) Phylogenetic Tree(s): OG_03_0007203_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00340p00012500
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
Solyc11g005550.2.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.03 Archaeplastida
Pp3c23_12950V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.01 LandPlants
Solyc11g005550.2.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 186 210
IPR001680 WD40_repeat 53 88
IPR001680 WD40_repeat 263 298
IPR001680 WD40_repeat 216 256
IPR001680 WD40_repeat 93 130
IPR001680 WD40_repeat 12 46
No external refs found!