GSVIVT01018272001


Description : 17.5.2 hormone metabolism.ethylene.signal transduction Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein ?//CONTAINS one AP2 domain. Functions as activator of GCC boxñdependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01018272001
Cluster HCCA cluster: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.04 Gene family
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G47520 HRE2 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.05 Gene family
AT4G32800 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G05410 DREB2A, DREB2 DRE-binding protein 2A 0.02 Gene family
AT5G13330 Rap2.6L related to AP2 6l 0.02 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.04 Gene family
GSVIVT01018270001 No alias No description available 0.06 Gene family
GSVIVT01018271001 No alias No description available 0.06 Gene family
GSVIVT01021146001 No alias No description available 0.03 Gene family
GSVIVT01028314001 No alias No description available 0.06 Gene family
GSVIVT01032983001 No alias No description available 0.04 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01036201001 No alias No description available 0.05 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os01g21120 Os01g0313300 No description available 0.02 Gene family
LOC_Os01g54890 Os01g0752500 No description available 0.02 Gene family
LOC_Os01g58420 Os01g0797600 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
LOC_Os01g66270 Os01g0885900 No description available 0.03 Gene family
LOC_Os02g32140 Os02g0521100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g43970 Os02g0657000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os03g08460 Os03g0182800 No description available 0.03 Gene family
LOC_Os04g32620 Os04g0398000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os04g46400 Os04g0549700 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os05g29810 Os05g0361700 No description available 0.02 Gene family
LOC_Os05g39590 Os05g0473300 No description available 0.02 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g08340 Os06g0181700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g11940 Os06g0223100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os07g22730 Os07g0410300 No description available 0.04 Gene family
LOC_Os08g07700 Os08g0173700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os08g31580 Os08g0408500 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os08g36920 Os08g0474000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os08g44960 No alias 17.5.3 hormone... 0.02 Gene family
LOC_Os09g26420 Os09g0434500 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os10g25170 Os10g0390800 No description available 0.03 Gene family
LOC_Os11g13840 Os11g0242300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os12g39330 Os12g0582900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_15251g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_179692g0020 No alias No description available 0.03 Gene family
MA_198113g0010 No alias No description available 0.03 Gene family
MA_23847g0010 No alias No description available 0.03 Gene family
MA_2407076g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
MA_27309g0010 No alias No description available 0.03 Gene family
MA_411387g0010 No alias No description available 0.03 Gene family
MA_42369g0010 No alias No description available 0.03 Gene family
MA_4929994g0010 No alias No description available 0.01 Gene family
MA_5530g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_6447416g0010 No alias No description available 0.03 Gene family
MA_9321671g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_9905g0010 No alias No description available 0.02 Gene family
Smo104980 PACid_15415938 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Smo409196 PACid_15422590 No description available 0.03 Gene family
Solyc01g090370.2.1 Solyc01g090370.2 No description available 0.04 Gene family
Solyc02g077360.1.1 Solyc02g077360.1 No description available 0.04 Gene family
Solyc02g090800.1.1 Solyc02g090800.1 No description available 0.02 Gene family
Solyc03g005510.2.1 Solyc03g005510.2 No description available 0.02 Gene family
Solyc03g005520.1.1 Solyc03g005520.1 No description available 0.02 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.04 Gene family
Solyc04g072300.1.1 Solyc04g072300.1 No description available 0.03 Gene family
Solyc04g080910.1.1 Solyc04g080910.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc06g066540.1.1 Solyc06g066540.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.03 Gene family
Solyc08g078180.1.1 Solyc08g078180.1 No description available 0.02 Gene family
Solyc09g089910.1.1 Solyc09g089910.1 No description available 0.04 Gene family
Solyc09g089930.2.1 Solyc09g089930.2 No description available 0.04 Gene family
Solyc11g006050.1.1 Solyc11g006050.1 No description available 0.02 Gene family
Solyc12g008350.2.1 Solyc12g008350.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc12g009490.2.1 Solyc12g009490.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc12g013660.2.1 Solyc12g013660.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc12g042210.2.1 Solyc12g042210.2 No description available 0.01 Gene family
Zm00001d002011 GRMZM2G067463 No description available 0.02 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.05 Gene family
Zm00001d025477 GRMZM2G424348 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d026182 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d026486 GRMZM2G104260 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d027925 GRMZM2G018984 No description available 0.04 Gene family
Zm00001d031498 GRMZM2G016079 No description available 0.03 Gene family
Zm00001d031861 GRMZM2G028386 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d034920 GRMZM2G381441 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d043491 GRMZM2G474326 No description available 0.06 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 82 132
No external refs found!