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Description : core component *(RBX1) of CULLIN-based E3 ubiquitin ligase complexes & original description: none
Gene families : OG0000234 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000234_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ehy_g25589 | |
| Cluster | HCCA: Cluster_99 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cba_g35671 | No alias | core component *(RBX1) of CULLIN-based E3 ubiquitin... | 0.02 | OrthoFinder output from all 39 species | |
| Dcu_g24393 | No alias | core component *(RBX1) of CULLIN-based E3 ubiquitin... | 0.01 | OrthoFinder output from all 39 species | |
| Dcu_g49763 | No alias | core component *(RBX1) of CULLIN-based E3 ubiquitin... | 0.01 | OrthoFinder output from all 39 species | |
| LOC_Os02g47870.1 | LOC_Os02g47870 | RUB ligase E3 protein (RBX1). UBQ-E2-recruiting... | 0.01 | OrthoFinder output from all 39 species | |
| MA_10427994g0010 | No alias | RUB ligase E3 protein (RBX1). UBQ-E2-recruiting... | 0.03 | OrthoFinder output from all 39 species | |
| Solyc12g009120.2.1 | HRT1, ATRBX1,... | RUB ligase E3 protein (RBX1). UBQ-E2-recruiting... | 0.02 | OrthoFinder output from all 39 species | |
| Zm00001e017143_P001 | Zm00001e017143 | RUB ligase E3 protein (RBX1). UBQ-E2-recruiting... | 0.01 | OrthoFinder output from all 39 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| MF | GO:0051499 | D-aminoacyl-tRNA deacylase activity | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024766 | Znf_RING_H2 | 98 | 156 |
| No external refs found! |