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  5. Ehy_g25561

Ehy_g25561 (VPS60.1)


Aliases : VPS60.1

Description : associated protein of ESCRT-III complex *(VPS60) & original description: none


Gene families : OG0002554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002554_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g25561

Target Alias Description ECC score Gene Family Method Actions
AT3G10640 VPS60.1 SNF7 family protein 0.03 OrthoFinder output from all 47 species
Aev_g09924 VPS60.1 associated protein of ESCRT-III complex *(VPS60) &... 0.03 OrthoFinder output from all 47 species
Dac_g08377 VPS60.1 associated protein of ESCRT-III complex *(VPS60) &... 0.03 OrthoFinder output from all 47 species
Dde_g11197 VPS60.1 associated protein of ESCRT-III complex *(VPS60) &... 0.03 OrthoFinder output from all 47 species
Msp_g03877 VPS60.1 associated protein of ESCRT-III complex *(VPS60) &... 0.03 OrthoFinder output from all 47 species
Sam_g27432 No alias associated protein of ESCRT-III complex *(VPS60) &... 0.03 OrthoFinder output from all 47 species
Solyc11g006500.2.1 VPS60.1, Solyc11g006500 VPS60 associated protein of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
Zm00001e029711_P001 VPS60.1, Zm00001e029711 VPS60 associated protein of ESCRT-III complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 78 267
No external refs found!