GSVIVT01017204001


Description : 34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01017204001
Cluster HCCA cluster: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AT2G29940 ATPDR3, PDR3 pleiotropic drug resistance 3 0.04 Gene family
AT2G36380 PDR6, ATPDR6 pleiotropic drug resistance 6 0.03 Gene family
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.02 Gene family
AT3G53480 PIS1, ABCG37,... pleiotropic drug resistance 9 0.02 Gene family
AT4G15233 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.05 Gene family
AT4G15236 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Gene family
GSVIVT01016991001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01034748001 No alias 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
LOC_Os01g42380 Os01g0609300 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os01g42410 Os01g0609900 34.16 transport.ABC transporters and multidrug... 0.05 Gene family
LOC_Os07g33780 Os07g0522500 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
LOC_Os08g29570 Os08g0384500 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
LOC_Os11g37700 Os11g0587600 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_10426978g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
MA_10427561g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_10427561g0020 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_38272g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_42871g0010 No alias No description available 0.04 Gene family
Smo441717 PACid_15410131 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo441722 PACid_15410157 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc01g101070.3.1 Solyc01g101070.3 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc03g120980.3.1 Solyc03g120980.3 No description available 0.02 Gene family
Solyc08g067620.3.1 Solyc08g067620.3 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc09g091670.3.1 Solyc09g091670.3 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
Zm00001d025012 GRMZM2G319138 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Zm00001d034940 GRMZM2G391815 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d044442 GRMZM5G874955 34.16 transport.ABC transporters and multidrug... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
MF GO:0016887 ATPase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013581 PDR_assoc 2409 2473
IPR013581 PDR_assoc 720 783
IPR003439 ABC_transporter-like 167 349
IPR003439 ABC_transporter-like 1856 2038
IPR013525 ABC_2_trans 506 715
IPR013525 ABC_2_trans 2869 3083
IPR013525 ABC_2_trans 1178 1392
IPR013525 ABC_2_trans 2194 2404
IPR029481 ABC_trans_N 1769 1828
IPR029481 ABC_trans_N 80 142
IPR003439 ABC_transporter-like 881 1033
IPR003439 ABC_transporter-like 2572 2724
No external refs found!