GSVIVT01017075001


Description : No description available


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01017075001

Target Alias Description ECC score Gene Family Method Actions
AT1G17630 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 Gene family
AT2G01510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT3G15930 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT4G14170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT4G21065 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT4G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 Gene family
AT5G47460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Gene family
AT5G56310 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.11 Gene family
LOC_Os01g60250 Os01g0818200 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os04g41120 Os04g0488200 No description available 0.06 Gene family
LOC_Os08g25280 Os08g0340900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_100287g0010 No alias No description available 0.02 Gene family
MA_10164206g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_10426261g0020 No alias No description available 0.08 Gene family
MA_104937g0010 No alias No description available 0.14 Gene family
MA_1109g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.09 Gene family
MA_112849g0010 No alias No description available 0.03 Gene family
MA_116829g0010 No alias No description available 0.06 Gene family
MA_13057g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
MA_136188g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
MA_140591g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_17949g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
MA_193080g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_20599g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
MA_210823g0010 No alias No description available 0.05 Gene family
MA_230261g0010 No alias No description available 0.07 Gene family
MA_27147g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_32723g0010 No alias No description available 0.09 Gene family
MA_33151g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.1 Gene family
MA_501007g0010 No alias No description available 0.05 Gene family
MA_519985g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_61422g0020 No alias No description available 0.03 Gene family
MA_83898g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_9258g0010 No alias No description available 0.06 Gene family
MA_9526611g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_953793g0020 No alias No description available 0.02 Gene family
MA_961981g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Smo105776 PACid_15417271 No description available 0.09 Gene family
Smo30579 PACid_15414938 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
Smo82024 PACid_15407991 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc01g006920.3.1 Solyc01g006920.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc01g007850.2.1 Solyc01g007850.2 No description available 0.02 Gene family
Solyc01g010510.3.1 Solyc01g010510.3 No description available 0.03 Gene family
Solyc01g080190.3.1 Solyc01g080190.3 No description available 0.02 Gene family
Solyc01g081290.3.1 Solyc01g081290.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc01g081560.2.1 Solyc01g081560.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc01g100800.2.1 Solyc01g100800.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc03g063160.1.1 Solyc03g063160.1 No description available 0.03 Gene family
Solyc03g093630.2.1 Solyc03g093630.2 No description available 0.04 Gene family
Solyc03g111210.3.1 Solyc03g111210.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc04g016540.2.1 Solyc04g016540.2 No description available 0.1 Gene family
Solyc04g063300.2.1 Solyc04g063300.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc04g064750.2.1 Solyc04g064750.2 No description available 0.02 Gene family
Solyc04g076330.2.1 Solyc04g076330.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc05g012630.1.1 Solyc05g012630.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc06g066080.1.1 Solyc06g066080.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc06g082880.2.1 Solyc06g082880.2 No description available 0.02 Gene family
Solyc07g055310.1.1 Solyc07g055310.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc08g023640.1.1 Solyc08g023640.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc09g010070.1.1 Solyc09g010070.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc09g065710.1.1 Solyc09g065710.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc11g005960.1.1 Solyc11g005960.1 No description available 0.02 Gene family
Solyc11g008940.1.1 Solyc11g008940.1 No description available 0.02 Gene family
Solyc11g066920.1.1 Solyc11g066920.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc11g067210.1.1 Solyc11g067210.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d003047 GRMZM2G077420 No description available 0.04 Gene family
Zm00001d013941 GRMZM2G073017 No description available 0.03 Gene family
Zm00001d017518 GRMZM2G014977 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d021411 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d030143 GRMZM2G430710 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d033495 GRMZM5G849971 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.15 Gene family
Zm00001d037254 GRMZM2G060337 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d037891 No alias No description available 0.06 Gene family
Zm00001d044547 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d050938 GRMZM2G163396 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Zm00001d051816 GRMZM2G029859 No description available 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 318 342
IPR002885 Pentatricopeptide_repeat 216 238
IPR032867 DYW_dom 418 540
IPR002885 Pentatricopeptide_repeat 245 290
IPR002885 Pentatricopeptide_repeat 140 187
No external refs found!