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  5. Ehy_g24915

Ehy_g24915 (EMB80, EMB1275, DEK1, ATDEK1)


Aliases : EMB80, EMB1275, DEK1, ATDEK1

Description : C2-class (Phytocalpain) calcium-activated protease & original description: none


Gene families : OG0002821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002821_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g24915

Target Alias Description ECC score Gene Family Method Actions
AT1G55350 EMB80, EMB1275,... calpain-type cysteine protease family 0.03 OrthoFinder output from all 47 species
Aev_g18410 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.04 OrthoFinder output from all 47 species
Als_g47927 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.03 OrthoFinder output from all 47 species
Aob_g29688 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.02 OrthoFinder output from all 47 species
Azfi_s0076.g037769 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.02 OrthoFinder output from all 47 species
Ceric.1Z029900.1 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.114 No alias Calpain-type cysteine protease ADL1 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
MA_129368g0010 EMB80, EMB1275,... calcium-activated protease (Phytocalpain) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024862 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.04 OrthoFinder output from all 47 species
Solyc12g100360.1.1 EMB80, EMB1275,... calcium-activated protease (Phytocalpain) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR001300 Peptidase_C2_calpain_cat 1684 1983
IPR022682 Calpain_domain_III 1994 2130
No external refs found!