GSVIVT01016510001


Description : No description available


Gene families : OG_01_0000020 (Gene family) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01016510001
Cluster HCCA cluster: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AT3G13430 No alias RING/U-box superfamily protein 0.06 Gene family
AT3G46620 No alias zinc finger (C3HC4-type RING finger) family protein 0.04 Gene family
AT5G59550 No alias zinc finger (C3HC4-type RING finger) family protein 0.08 Gene family
LOC_Os01g74040 Os01g0972000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
LOC_Os03g16480 Os03g0271600 No description available 0.04 Gene family
LOC_Os05g01940 Os05g0110000 No description available 0.05 Gene family
LOC_Os06g42700 Os06g0633500 31.1 cell.organisation Encodes a RING-H2 protein that... 0.02 Gene family
Solyc02g065650.1.1 Solyc02g065650.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc03g098590.3.1 Solyc03g098590.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc03g114680.3.1 Solyc03g114680.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc08g067290.3.1 Solyc08g067290.3 17.1.2 hormone metabolism.abscisic acid.signal... 0.02 Gene family
Solyc12g008473.1.1 Solyc12g008473.1 No description available 0.02 Gene family
Zm00001d011076 GRMZM2G364612 No description available 0.06 Gene family
Zm00001d012564 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d028590 GRMZM5G828820 No description available 0.02 Gene family
Zm00001d035677 GRMZM2G567897 No description available 0.04 Gene family
Zm00001d047560 GRMZM2G027120 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATCRT1 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 160 202
IPR032799 TAXi_C 506 672
IPR032861 TAXi_N 377 432
IPR010543 DUF1117 224 320
IPR039525 RNF126-like_zinc-ribbon 21 46
No external refs found!