MA_17048g0010


Description : transcription factor (HD-ZIP IV)


Gene families : OG_01_0000182 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000182_tree ,
OG_02_0000064 (LandPlants) Phylogenetic Tree(s): OG_02_0000064_tree ,
OG_03_0001799 (SeedPlants) Phylogenetic Tree(s): OG_03_0001799_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_17048g0010
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00094630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT1G05230 HDG2 homeodomain GLABROUS 2 0.03 Archaeplastida
AT1G34650 HDG10 homeodomain GLABROUS 10 0.04 Archaeplastida
AT4G04890 PDF2 protodermal factor 2 0.04 Archaeplastida
AT4G21750 ATML1 Homeobox-leucine zipper family protein / lipid-binding... 0.04 Archaeplastida
AT5G07260 No alias START (StAR-related lipid-transfer) lipid-binding domain 0.02 Archaeplastida
GSVIVT01012643001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01030605001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Gb_05082 No alias transcription factor (HD-ZIP IV) 0.06 Archaeplastida
LOC_Os02g45250.1 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
LOC_Os04g53540.3 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
LOC_Os06g10600.1 No alias transcription factor (HD-ZIP IV) 0.08 Archaeplastida
LOC_Os08g04190.1 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
LOC_Os08g08820.2 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
LOC_Os09g35760.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
LOC_Os10g42490.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_1086446g0020 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_602026g0020 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_761114g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Mp7g09710.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Pp3c1_24020V3.1 No alias protodermal factor 2 0.02 Archaeplastida
Solyc01g091630.3.1 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
Solyc02g080260.4.1 No alias transcription factor (HD-ZIP IV) 0.06 Archaeplastida
Solyc03g031760.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g120620.3.1 No alias transcription factor (HD-ZIP IV) 0.02 Archaeplastida
Solyc06g072310.3.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Solyc08g076370.3.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Zm00001e006870_P004 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Zm00001e015997_P002 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e017088_P001 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e021649_P002 No alias transcription factor (HD-ZIP IV) 0.06 Archaeplastida
Zm00001e023786_P003 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Zm00001e034755_P001 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
Zm00001e036212_P002 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
Zm00001e039947_P001 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e040312_P001 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e041695_P001 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e042218_P002 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
AT1G05230 HDG2 homeodomain GLABROUS 2 0.03 LandPlants
AT1G34650 HDG10 homeodomain GLABROUS 10 0.02 LandPlants
AT4G04890 PDF2 protodermal factor 2 0.03 LandPlants
AT4G17710 HDG4 homeodomain GLABROUS 4 0.02 LandPlants
AT4G21750 ATML1 Homeobox-leucine zipper family protein / lipid-binding... 0.02 LandPlants
GSVIVT01012643001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 LandPlants
GSVIVT01030605001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 LandPlants
Gb_05082 No alias transcription factor (HD-ZIP IV) 0.06 LandPlants
LOC_Os01g57890.1 No alias transcription factor (HD-ZIP IV) 0.01 LandPlants
LOC_Os02g45250.1 No alias transcription factor (HD-ZIP IV) 0.02 LandPlants
LOC_Os04g53540.3 No alias transcription factor (HD-ZIP IV) 0.03 LandPlants
LOC_Os06g10600.1 No alias transcription factor (HD-ZIP IV) 0.03 LandPlants
LOC_Os08g04190.1 No alias transcription factor (HD-ZIP IV) 0.02 LandPlants
LOC_Os08g08820.2 No alias transcription factor (HD-ZIP IV) 0.03 LandPlants
LOC_Os09g35760.1 No alias transcription factor (HD-ZIP IV) 0.02 LandPlants
LOC_Os10g42490.1 No alias transcription factor (HD-ZIP IV) 0.02 LandPlants
Pp3c2_10790V3.1 No alias protodermal factor 2 0.01 LandPlants
Solyc01g091630.3.1 No alias transcription factor (HD-ZIP IV) 0.03 LandPlants
Solyc02g080260.4.1 No alias transcription factor (HD-ZIP IV) 0.04 LandPlants
Solyc03g031760.4.1 No alias no hits & (original description: none) 0.03 LandPlants
Solyc06g072310.3.1 No alias transcription factor (HD-ZIP IV) 0.04 LandPlants
Solyc08g076370.3.1 No alias transcription factor (HD-ZIP IV) 0.04 LandPlants
Zm00001e021649_P002 No alias transcription factor (HD-ZIP IV) 0.03 LandPlants
Zm00001e034755_P001 No alias transcription factor (HD-ZIP IV) 0.02 LandPlants
Zm00001e040312_P001 No alias transcription factor (HD-ZIP IV) 0.02 LandPlants
Zm00001e041695_P001 No alias transcription factor (HD-ZIP IV) 0.01 LandPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001356 Homeobox_dom 101 156
No external refs found!