GSVIVT01016266001


Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus. auxin response factor 16 (ARF16)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01016266001
Cluster HCCA cluster: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AT3G61830 ARF18 auxin response factor 18 0.04 Gene family
GSVIVT01023149001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
GSVIVT01025198001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.07 Gene family
LOC_Os04g43910 Os04g0519700 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Solyc04g081235.1.1 Solyc04g081235.1 No description available 0.03 Gene family
Solyc05g047460.3.1 Solyc05g047460.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d023659 GRMZM2G006042 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d051172 GRMZM2G081406 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
BP GO:0009725 response to hormone IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010525 Auxin_resp 179 262
No external refs found!