GSVIVT01016208001


Description : 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases Pectin lyase-like superfamily protein


Gene families : OG_01_0000238 (Gene family) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01016208001
Cluster HCCA cluster: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
AT1G67750 No alias Pectate lyase family protein 0.04 Gene family
AT2G02720 No alias Pectate lyase family protein 0.03 Gene family
AT3G01270 No alias Pectate lyase family protein 0.02 Gene family
AT5G15110 No alias Pectate lyase family protein 0.03 Gene family
LOC_Os06g05209 Os06g0144200 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
LOC_Os06g05260 Os06g0144900 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
LOC_Os06g05272 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
Zm00001d000216 GRMZM2G323418 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Zm00001d004448 GRMZM2G131912 10.6.3 cell wall.degradation.pectate lyases and... 0.04 Gene family
Zm00001d032806 GRMZM2G472060 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002022 Pec_lyase 154 335
No external refs found!