1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g24333

Ehy_g24333


Description : substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(KFB-PAL) & original description: none


Gene families : OG0000998 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000998_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g24333

Target Alias Description ECC score Gene Family Method Actions
Aev_g46711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G006200.1 Ceric.19G006200 substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ceric.19G006400.1 Ceric.19G006400 substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
LOC_Os11g14140.1 LOC_Os11g14140 proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.03 OrthoFinder output from all 47 species
Len_g12405 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
MA_10352800g0010 No alias F-box/kelch-repeat protein At2g44130 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10433132g0010 No alias F-box/kelch-repeat protein At1g80440 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g11749 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Pir_g09413 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g31146 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003410 No alias not classified & original description: CDS=1-1110 0.03 OrthoFinder output from all 47 species
Solyc10g080610.1.1 Solyc10g080610 proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.03 OrthoFinder output from all 47 species
Zm00001e021300_P001 Zm00001e021300 proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 185 219
IPR006652 Kelch_1 136 169
IPR001810 F-box_dom 9 48
No external refs found!