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  5. Ehy_g23978

Ehy_g23978


Description : not classified & original description: none


Gene families : OG0001514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g23978
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00203p00009790 evm_27.TU.AmTr_v1... Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
AT2G39120 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.03 OrthoFinder output from all 47 species
AT3G58520 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.03 OrthoFinder output from all 47 species
Aev_g02160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G075200.1 RPD1, Ceric.16G075200 not classified & original description: pacid=50589258... 0.05 OrthoFinder output from all 47 species
Ceric.24G018700.1 Ceric.24G018700 not classified & original description: pacid=50629155... 0.05 OrthoFinder output from all 47 species
Dac_g00875 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12385 RPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01416 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g04580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_04492 No alias WTF9 mitochondrial RNA splicing factor 0.05 OrthoFinder output from all 47 species
LOC_Os02g32540.1 LOC_Os02g32540 no description available(sp|q9zuz6|wtf9_arath : 134.0) 0.02 OrthoFinder output from all 47 species
LOC_Os03g57270.1 LOC_Os03g57270 WTF9 mitochondrial RNA splicing factor 0.02 OrthoFinder output from all 47 species
LOC_Os04g46170.1 LOC_Os04g46170 no description available(sp|q9zuz6|wtf9_arath : 147.0) 0.02 OrthoFinder output from all 47 species
MA_456914g0010 No alias no description available(sp|q9zuz6|wtf9_arath : 228.0) 0.02 OrthoFinder output from all 47 species
Msp_g06839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07478 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31693 RPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006573_P002 Zm00001e006573 Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e014695_P001 Zm00001e014695 no description available(sp|q9zuz6|wtf9_arath : 128.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0032787Family monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021099 PORR_domain 47 382
No external refs found!