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  5. Ehy_g23930

Ehy_g23930 (PDCB1)


Aliases : PDCB1

Description : not classified & original description: none


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g23930
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00035570 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g34214 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02423 PDCB5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g29980.1 LOC_Os02g29980 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g01621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g35967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g56789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g056310.3.1 Solyc07g056310 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e005720_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 51 126
No external refs found!