GSVIVT01014763001


Description : 35.1 not assigned.no ontology Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. TEX1


Gene families : OG_01_0006430 (Gene family) Phylogenetic Tree(s): OG0006430_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01014763001
Cluster HCCA cluster: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021319.66 No alias 35.1 not assigned.no ontology Encodes a component of the... 0.01 Gene family
LOC_Os09g12710 Os09g0298400 35.1 not assigned.no ontology Encodes a component of the... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 60 94
IPR001680 WD40_repeat 13 46
IPR001680 WD40_repeat 182 218
IPR024977 Apc4_WD40_dom 233 282
No external refs found!