AMTR_s00218p00024050 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00218.6

Description : DNA damage response.DNA repair polymerase activities.DNA polymerase theta (TEB)


Gene families : OG_01_0002210 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002210_tree ,
OG_02_0003355 (LandPlants) Phylogenetic Tree(s): OG_02_0003355_tree ,
OG_03_0006737 (SeedPlants) Phylogenetic Tree(s): OG_03_0006737_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00218p00024050
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g19370.1 No alias DNA polymerase theta (TEB) 0.03 Archaeplastida
MA_10435776g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c5_12930V3.1 No alias helicases;ATP-dependent helicases;nucleic acid... 0.03 Archaeplastida
LOC_Os12g19370.1 No alias DNA polymerase theta (TEB) 0.03 LandPlants
LOC_Os12g19370.1 No alias DNA polymerase theta (TEB) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001098 DNA-dir_DNA_pol_A_palm_dom 614 1027
No external refs found!