GSVIVT01014682001


Description : 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases Pectin lyase-like superfamily protein


Gene families : OG_01_0000238 (Gene family) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01014682001
Cluster HCCA cluster: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AT1G14420 AT59 Pectate lyase family protein 0.02 Gene family
AT4G13210 No alias Pectin lyase-like superfamily protein 0.07 Gene family
AT4G13710 No alias Pectin lyase-like superfamily protein 0.04 Gene family
AT5G55720 No alias Pectin lyase-like superfamily protein 0.07 Gene family
GSVIVT01003984001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
LOC_Os04g05050 Os04g0137201 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
MA_91467g0010 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
Smo407495 PACid_15419124 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
Solyc02g087670.3.1 Solyc02g087670.3 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc11g008140.2.1 Solyc11g008140.2 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002022 Pec_lyase 64 248
No external refs found!