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  5. Ehy_g23300

Ehy_g23300 (SPL12)


Aliases : SPL12

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g23300

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00197p00030350 SPL7, ATSPL7,... Nutrient uptake.copper uptake.regulation.SPL7 copper... 0.02 OrthoFinder output from all 47 species
Adi_g013176 SPL10 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g026383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67363.t1 SPL8, Aspi01Gene67363 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1820.g107212 No alias not classified & original description: CDS=1-336 0.03 OrthoFinder output from all 47 species
Cba_g24520 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g45815 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07077 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15545 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30412 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 34 107
No external refs found!