GSVIVT01014287001


Description : 33.99 development.unspecified Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM. Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2. CUP-SHAPED COTYLEDON 2 (CUC2)


Gene families : OG_01_0000027 (Gene family) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01014287001
Cluster HCCA cluster: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AT1G54330 ANAC020, NAC020 NAC domain containing protein 20 0.03 Gene family
AT1G76420 ANAC031, NAC368, CUC3 NAC (No Apical Meristem) domain transcriptional... 0.05 Gene family
AT2G27300 ANAC040, NTL8 NTM1-like 8 0.03 Gene family
AT5G53950 ATCUC2, ANAC098, CUC2 NAC (No Apical Meristem) domain transcriptional... 0.03 Gene family
LOC_Os06g04090 Os06g0131700 33.99 development.unspecified NAC transcription factor... 0.03 Gene family
LOC_Os06g23650 Os06g0344900 33.99 development.unspecified Transcriptional activator... 0.02 Gene family
LOC_Os08g40030 Os08g0511200 33.99 development.unspecified Identified in an enhancer... 0.06 Gene family
Solyc02g084345.1.1 Solyc02g084345.1 33.99 development.unspecified Encodes a NAC-domain... 0.02 Gene family
Solyc03g083880.3.1 Solyc03g083880.3 33.99 development.unspecified Encodes a NAC-domain... 0.02 Gene family
Solyc06g063430.2.1 Solyc06g063430.2 33.99 development.unspecified NAC domain protein. SMB,... 0.02 Gene family
Solyc06g069100.2.1 Solyc06g069100.2 33.99 development.unspecified NAC domain containing... 0.03 Gene family
Solyc06g069710.3.1 Solyc06g069710.3 33.99 development.unspecified NAC domain containing... 0.04 Gene family
Solyc07g062840.3.1 Solyc07g062840.3 33.99 development.unspecified Transcriptional activator... 0.07 Gene family
Solyc08g074300.3.1 Solyc08g074300.3 33.99 development.unspecified Arabidopsis NAC domain... 0.03 Gene family
Solyc12g017400.2.1 Solyc12g017400.2 33.99 development.unspecified NAC-domain protein.... 0.02 Gene family
Solyc12g036480.2.1 Solyc12g036480.2 33.99 development.unspecified NAC domain containing... 0.03 Gene family
Zm00001d031463 GRMZM2G430522 33.99 development.unspecified Identified in an enhancer... 0.04 Gene family
Zm00001d033308 No alias 33.99 development.unspecified NAC domain containing... 0.02 Gene family
Zm00001d035266 GRMZM2G393433 33.99 development.unspecified Transcriptional activator... 0.02 Gene family
Zm00001d048456 No alias 33.99 development.unspecified Encodes a NAC-domain... 0.03 Gene family
Zm00001d049678 GRMZM2G069047 33.99 development.unspecified NAC transcription factor... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003441 NAC-dom 15 141
No external refs found!