AMTR_s00006p00266250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.285

Description : Protein trichome birefringence-like 20 OS=Arabidopsis thaliana


Gene families : OG_01_0000288 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000288_tree ,
OG_02_0020348 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0001537 (SeedPlants) Phylogenetic Tree(s): OG_03_0001537_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00266250
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00112880 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.modification and... 0.04 Archaeplastida
AT3G02440 TBL20 TRICHOME BIREFRINGENCE-LIKE 20 0.03 Archaeplastida
AT3G28150 TBL22 TRICHOME BIREFRINGENCE-LIKE 22 0.01 Archaeplastida
GSVIVT01019502001 No alias Protein trichome birefringence-like 23 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01036469001 No alias Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_25866 No alias mannan O-acetyltransferase (MOAT) 0.03 Archaeplastida
LOC_Os01g46400.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os02g49650.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os02g49660.1 No alias Protein trichome birefringence-like 20 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os06g12820.1 No alias Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os06g12860.1 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os06g16250.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os07g15320.1 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c16_10090V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.04 Archaeplastida
Pp3c16_2250V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.03 Archaeplastida
Solyc02g089710.3.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
Solyc03g046270.4.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e004741_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e015715_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e020298_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e020949_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e030881_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e030883_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e036072_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e004741_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR026057 PC-Esterase 128 169
IPR025846 PMR5_N_dom 74 127
No external refs found!