GSVIVT01014050001


Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0009262 (Gene family) Phylogenetic Tree(s): OG0009262_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01014050001
Cluster HCCA cluster: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AT4G30825 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Gene family
LOC_Os09g25550 Os09g0423300 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_187850g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc07g005950.3.1 Solyc07g005950.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 662 705
IPR002885 Pentatricopeptide_repeat 210 250
IPR002885 Pentatricopeptide_repeat 345 391
IPR002885 Pentatricopeptide_repeat 766 807
IPR002885 Pentatricopeptide_repeat 832 880
IPR002885 Pentatricopeptide_repeat 279 306
IPR002885 Pentatricopeptide_repeat 730 760
IPR002885 Pentatricopeptide_repeat 558 583
IPR002885 Pentatricopeptide_repeat 488 511
IPR002885 Pentatricopeptide_repeat 174 199
IPR002885 Pentatricopeptide_repeat 591 617
IPR002885 Pentatricopeptide_repeat 524 549
IPR002885 Pentatricopeptide_repeat 315 343
No external refs found!