GSVIVT01013901001


Description : 27.3.12 RNA.regulation of transcription.C3H zinc finger family Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation. PEI1


Gene families : OG_01_0003078 (Gene family) Phylogenetic Tree(s): OG0003078_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01013901001
Cluster HCCA cluster: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT5G07500 PEI1 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.06 Gene family
LOC_Os07g47240 Os07g0668600 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.04 Gene family
Solyc05g041715.1.1 Solyc05g041715.1 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.07 Gene family
Solyc05g042181.1.1 Solyc05g042181.1 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.02 Gene family
Solyc05g043213.1.1 Solyc05g043213.1 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.03 Gene family
Solyc05g043232.1.1 Solyc05g043232.1 No description available 0.07 Gene family
Solyc05g043234.1.1 Solyc05g043234.1 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.02 Gene family
Solyc05g043236.1.1 Solyc05g043236.1 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.04 Gene family
Solyc05g052055.1.1 Solyc05g052055.1 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.03 Gene family
Solyc09g014624.1.1 Solyc09g014624.1 No description available 0.1 Gene family
Solyc09g014628.1.1 Solyc09g014628.1 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.04 Gene family
Zm00001d022494 GRMZM2G348914 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000571 Znf_CCCH 139 159
No external refs found!