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  5. Ehy_g22348

Ehy_g22348


Description : not classified & original description: none


Gene families : OG0000394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g22348
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00119280 evm_27.TU.AmTr_v1... Protein FLX-like 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G55170 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g017327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g042499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g38781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1329.g101582 No alias not classified & original description: CDS=1-237 0.02 OrthoFinder output from all 47 species
Cba_g06272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12870 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02228 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo414635 No alias Protein FLX-like 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Spa_g53328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26867 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007804_P010 Zm00001e007804 Protein FLX-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 380 448
No external refs found!