GSVIVT01013204001


Description : 27.4 RNA.RNA binding Encodes a splicing factor SUA (suppressor of abi3-5), homologous to the human protein RBM5. Controls alternative splicing of the developmental regulator ABI3. suppressor of abi3-5 (SUA)


Gene families : OG_01_0004209 (Gene family) Phylogenetic Tree(s): OG0004209_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01013204001
Cluster HCCA cluster: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AT3G54230 SUA suppressor of abi3-5 0.11 Gene family
LOC_Os02g07070 Os02g0167500 27.4 RNA.RNA binding Encodes a splicing factor SUA... 0.08 Gene family
MA_188532g0010 No alias 27.4 RNA.RNA binding Encodes a splicing factor SUA... 0.04 Gene family
Smo402018 PACid_15423429 27.4 RNA.RNA binding Encodes a splicing factor SUA... 0.04 Gene family
Smo407112 PACid_15416541 27.4 RNA.RNA binding Encodes a splicing factor SUA... 0.04 Gene family
Solyc08g077310.3.1 Solyc08g077310.3 27.4 RNA.RNA binding Encodes a splicing factor SUA... 0.14 Gene family
Zm00001d011742 GRMZM2G151614 27.4 RNA.RNA binding Encodes a splicing factor SUA... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 292 349
IPR000504 RRM_dom 454 520
IPR000467 G_patch_dom 954 995
No external refs found!