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  5. AMTR_s00203p00031460

AMTR_s00203p00031460 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00203.9

Description : Metal transporter Nramp5 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000462 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000462_tree ,
OG_02_0000754 (LandPlants) Phylogenetic Tree(s): OG_02_0000754_tree ,
OG_03_0013622 (SeedPlants) Phylogenetic Tree(s): OG_03_0013622_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00203p00031460
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008828001 No alias Metal transporter Nramp5 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
LOC_Os07g15460.1 No alias metal cation transporter (NRAMP) 0.02 Archaeplastida
MA_100211g0010 No alias metal cation transporter (NRAMP) 0.02 Archaeplastida
MA_10430197g0030 No alias metal cation transporter (NRAMP) 0.03 Archaeplastida
MA_10437046g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_104715g0010 No alias Metal transporter Nramp5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_171796g0010 No alias Metal transporter Nramp5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_9182156g0010 No alias metal cation transporter (NRAMP) 0.04 Archaeplastida
Pp3c2_37310V3.1 No alias natural resistance associated macrophage protein 4 0.02 Archaeplastida
Smo173368 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
LOC_Os02g03900.1 No alias metal cation transporter (NRAMP) 0.01 LandPlants
MA_100211g0010 No alias metal cation transporter (NRAMP) 0.02 LandPlants
MA_10430197g0030 No alias metal cation transporter (NRAMP) 0.02 LandPlants
MA_104715g0010 No alias Metal transporter Nramp5 OS=Oryza sativa subsp. japonica... 0.04 LandPlants
MA_171796g0010 No alias Metal transporter Nramp5 OS=Oryza sativa subsp. japonica... 0.02 LandPlants
Smo173368 No alias Solute transport.carrier-mediated transport.APC... 0.01 LandPlants
Solyc03g116900.3.1 No alias metal cation transporter (NRAMP) 0.02 LandPlants
MA_104715g0010 No alias Metal transporter Nramp5 OS=Oryza sativa subsp. japonica... 0.04 SeedPlants
MA_171796g0010 No alias Metal transporter Nramp5 OS=Oryza sativa subsp. japonica... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEA Interproscan
BP GO:0006810 transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001046 NRAMP_fam 15 123
No external refs found!