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  5. Ehy_g21938

Ehy_g21938


Description : not classified & original description: none


Gene families : OG0000898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g21938

Target Alias Description ECC score Gene Family Method Actions
Adi_g059258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g17461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02012 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19277 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G038800.1 Ceric.23G038800 not classified & original description: pacid=50609666... 0.04 OrthoFinder output from all 47 species
Ceric.37G013900.1 Ceric.37G013900 not classified & original description: pacid=50615693... 0.02 OrthoFinder output from all 47 species
Dcu_g13939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g40270.1 LOC_Os07g40270 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g07380.1 LOC_Os09g07380 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10430352g0010 No alias FRIGIDA-like protein 4b OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10436820g0010 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g04962 FRL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25061 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g33438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026441 No alias not classified & original description: CDS=224-2032 0.02 OrthoFinder output from all 47 species
Spa_g09351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012474 Frigida 228 524
No external refs found!