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  5. Ehy_g21742

Ehy_g21742 (iqd2)


Aliases : iqd2

Description : not classified & original description: none


Gene families : OG0000740 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000740_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g21742

Target Alias Description ECC score Gene Family Method Actions
AT1G01110 IQD18 IQ-domain 18 0.03 OrthoFinder output from all 47 species
AT4G00820 iqd17 IQ-domain 17 0.02 OrthoFinder output from all 47 species
Aob_g12335 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22740 IQD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0190.g056933 IQD14 not classified & original description: CDS=42-1352 0.03 OrthoFinder output from all 47 species
Ceric.39G025000.1 IQD18, Ceric.39G025000 not classified & original description: pacid=50583633... 0.03 OrthoFinder output from all 47 species
Ehy_g02440 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14991 IQD5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g03190.1 iqd2, LOC_Os05g03190 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g02250.1 iqd17, LOC_Os08g02250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g08415 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_81306g0020 iqd2 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g23600.1 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g13108 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09602 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12516 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03234 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12855 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g084280.2.1 IQD3, Solyc10g084280 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e029506_P001 iqd2, Zm00001e029506 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 116 135
IPR025064 DUF4005 457 483
No external refs found!