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  5. Ehy_g21086

Ehy_g21086


Description : 5,10-methenyl-THF synthetase & original description: none


Gene families : OG0003580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g21086
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00235750 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrahydrofolate... 0.02 OrthoFinder output from all 47 species
AT1G76730 No alias NagB/RpiA/CoA transferase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g054516 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17445 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05916 No alias 5,10-methenyl-THF synthetase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12998 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g52013 No alias 5,10-methenyl-THF synthetase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os12g07020.1 LOC_Os12g07020 5,10-methenyl-THF synthetase 0.02 OrthoFinder output from all 47 species
Lfl_g01289 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09827 No alias 5,10-methenyl-THF synthetase & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g35372 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59490 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30533 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27966 No alias 5,10-methenyl-THF synthetase & original description: none 0.02 OrthoFinder output from all 47 species
Smo88014 No alias Coenzyme metabolism.tetrahydrofolate... 0.03 OrthoFinder output from all 47 species
Solyc04g071700.3.1 Solyc04g071700 5,10-methenyl-THF synthetase 0.02 OrthoFinder output from all 47 species
Spa_g04511 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 384 451
IPR002698 FTHF_cligase 110 308
No external refs found!