Description : 20.2.1 stress.abiotic.heat Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype. casein lytic proteinase B3 (CLPB3)

Gene families : OG_01_0000281 (Gene family) Phylogenetic Tree(s): OG0000281_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01011496001
Cluster HCCA cluster: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT1G74310 ATHSP101, HOT1, HSP101 heat shock protein 101 0.14 Gene family
AT2G25140 CLPB4, CLPB-M, HSP98.7 casein lytic proteinase B4 0.09 Gene family
AT5G15450 CLPB3, CLPB-P, APG6 casein lytic proteinase B3 0.08 Gene family
Cpa|evm.model.tig00021365.4 No alias No description available 0.01 Gene family
Cre11.g467644 No alias No description available 0.04 Gene family
LOC_Os02g08490 Os02g0181900 No description available 0.11 Gene family
LOC_Os03g31300 Os03g0426900 20.2.1 stress.abiotic.heat Encodes a... 0.1 Gene family
LOC_Os05g44340 Os05g0519700 No description available 0.11 Gene family
Smo170696 PACid_15407546 No description available 0.08 Gene family
Smo174539 PACid_15418459 No description available 0.09 Gene family
Smo411118 PACid_15406211 No description available 0.1 Gene family
Smo418380 PACid_15406020 No description available 0.03 Gene family
Solyc02g088610.3.1 Solyc02g088610.3 20.2.1 stress.abiotic.heat Encodes a... 0.08 Gene family
Solyc03g115230.3.1 Solyc03g115230.3 No description available 0.07 Gene family
Solyc06g011370.3.1 Solyc06g011370.3 No description available 0.04 Gene family
Zm00001d015520 GRMZM2G060561 No description available 0.05 Gene family
Zm00001d029557 GRMZM2G130121 20.2.1 stress.abiotic.heat Encodes a... 0.11 Gene family
Zm00001d038806 GRMZM2G360681 No description available 0.14 Gene family
Zm00001d047302 GRMZM2G162968 20.2.1 stress.abiotic.heat Encodes a... 0.14 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004176 Clp_N 174 225
IPR004176 Clp_N 99 148
IPR003959 ATPase_AAA_core 631 747
IPR003959 ATPase_AAA_core 283 415
IPR019489 Clp_ATPase_C 754 833
No external refs found!