GSVIVT01011484001


Description : 29.5.11 protein.degradation.ubiquitin U-box domain-containing protein


Gene families : OG_01_0003411 (Gene family) Phylogenetic Tree(s): OG0003411_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01011484001
Cluster HCCA cluster: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AT5G15400 No alias U-box domain-containing protein 0.04 Gene family
Cpa|evm.model.tig00000076.105 No alias 29.5.11 protein.degradation.ubiquitin U-box... 0.04 Gene family
MA_10429134g0020 No alias 29.5.11 protein.degradation.ubiquitin U-box... 0.02 Gene family
Smo142432 PACid_15412612 No description available 0.05 Gene family
Solyc02g088550.3.1 Solyc02g088550.3 29.5.11 protein.degradation.ubiquitin U-box... 0.08 Gene family
Zm00001d029561 GRMZM2G030805 29.5.11 protein.degradation.ubiquitin U-box... 0.04 Gene family
Zm00001d047306 GRMZM2G075104 29.5.11 protein.degradation.ubiquitin U-box... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019474 Ub_conjug_fac_E4_core 255 921
IPR003613 Ubox_domain 938 1008
No external refs found!