GSVIVT01011437001


Description : 10.7 cell wall.modification Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A10 (EXPA10)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01011437001
Cluster HCCA cluster: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.03 Gene family
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.08 Gene family
AT2G40610 EXPA8, ATHEXP... expansin A8 0.03 Gene family
AT4G01630 ATHEXP ALPHA... expansin A17 0.02 Gene family
AT5G02260 EXP9, EXPA9,... expansin A9 0.03 Gene family
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.05 Gene family
Cre14.g631950 No alias No description available 0.02 Gene family
GSVIVT01028474001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
GSVIVT01033691001 No alias 10.7 cell wall.modification putative expansin. Naming... 0.03 Gene family
LOC_Os01g14660 Os01g0249100 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os01g16770 Os01g0274500 10.7 cell wall.modification Encodes an expansin. Naming... 0.04 Gene family
LOC_Os03g06000 Os03g0155300 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os03g06020 Os03g0155700 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g06050 Os03g0156000 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g06060 Os03g0156300 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g21820 Os03g0336400 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os03g31480 Os03g0428700 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os04g15840 Os04g0228400 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os05g19600 Os05g0277000 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os06g41700 Os06g0621900 10.7 cell wall.modification expansin -like protein.... 0.02 Gene family
LOC_Os08g44790 Os08g0561900 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os10g30340 Os10g0439200 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os10g39110 Os10g0535900 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
MA_10299189g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_130258g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
MA_172610g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
MA_30127g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_35592g0020 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
MA_36587g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
MA_40671g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_4979g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_86877g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.04 Gene family
MA_915221g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Solyc02g088100.3.1 Solyc02g088100.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Solyc05g052245.1.1 Solyc05g052245.1 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Solyc06g049050.3.1 Solyc06g049050.3 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc06g051800.3.1 Solyc06g051800.3 10.7 cell wall.modification putative expansin. Naming... 0.05 Gene family
Solyc09g018020.3.1 Solyc09g018020.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.04 Gene family
Solyc10g084780.2.1 Solyc10g084780.2 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
Solyc12g089380.2.1 Solyc12g089380.2 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d016022 GRMZM2G146540 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d016054 GRMZM2G359799 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Zm00001d018031 GRMZM2G105844 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Zm00001d025018 GRMZM2G074585 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d027717 GRMZM2G173826 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d031906 GRMZM2G030531 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d032876 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d032881 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d032882 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
Zm00001d032886 GRMZM2G414779 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d034663 GRMZM2G368886 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d035102 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d035104 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d035109 GRMZM2G303937 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d038476 GRMZM2G361064 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Zm00001d040249 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d040379 GRMZM2G149605 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d047353 GRMZM2G127029 10.7 cell wall.modification Member of Alpha-Expansin... 0.04 Gene family
Zm00001d048418 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 148 225
IPR009009 RlpA-like_DPBB 60 137
No external refs found!