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  5. MA_140582g0010

MA_140582g0010


Description : Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana (sp|q9s7q2|pp124_arath : 231.0)


Gene families : OG_01_0008584 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008584_tree ,
OG_02_0007907 (LandPlants) Phylogenetic Tree(s): OG_02_0007907_tree ,
OG_03_0010613 (SeedPlants) Phylogenetic Tree(s): OG_03_0010613_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_140582g0010
Cluster HCCA: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00097240 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle machineries.RNA polymerase... 0.06 Archaeplastida
AT1G74850 PTAC2 plastid transcriptionally active 2 0.11 Archaeplastida
GSVIVT01007844001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.07 Archaeplastida
LOC_Os03g60910.1 No alias PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.08 Archaeplastida
Mp7g11380.1 No alias PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.06 Archaeplastida
Pp3c11_11830V3.1 No alias plastid transcriptionally active 2 0.06 Archaeplastida
Solyc03g113630.3.1 No alias PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.03 Archaeplastida
Zm00001e035964_P003 No alias PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.05 Archaeplastida
AMTR_s00007p00097240 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle machineries.RNA polymerase... 0.04 LandPlants
AT1G74850 PTAC2 plastid transcriptionally active 2 0.09 LandPlants
GSVIVT01007844001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.05 LandPlants
LOC_Os03g60910.1 No alias PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.07 LandPlants
Mp7g11380.1 No alias PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.05 LandPlants
Pp3c11_11830V3.1 No alias plastid transcriptionally active 2 0.03 LandPlants
AMTR_s00007p00097240 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 SeedPlants
AT1G74850 PTAC2 plastid transcriptionally active 2 0.09 SeedPlants
GSVIVT01007844001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.05 SeedPlants
LOC_Os03g60910.1 No alias PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.08 SeedPlants
Solyc03g113630.3.1 No alias PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.02 SeedPlants
Zm00001e035964_P003 No alias PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.01 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!