Description : component *(uL29) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000495 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000495_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Adi_g127405 | |
Cluster | HCCA: Cluster_176 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aop_g23213 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Cre14.g617900 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01025050001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
Gb_33813 | No alias | component RPL35 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g30050.1 | LOC_Os02g30050 | component RPL35 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Mp6g05620.1 | No alias | component RPL35 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g20361 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g06023 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g29671 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g31234 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g075620.3.1 | Solyc06g075620 | component RPL35 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Spa_g34294 | No alias | component *(uL29) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005576 | extracellular region | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
CC | GO:0005672 | transcription factor TFIIA complex | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
MF | GO:0015926 | glucosidase activity | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0051118 | glucan endo-1,3-alpha-glucosidase activity | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001854 | Ribosomal_L29/L35 | 8 | 64 |
No external refs found! |