AMTR_s00189p00041140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00189.6

Description : Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.SSIV-type starch synthase


Gene families : OG_01_0000161 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000161_tree ,
OG_02_0002023 (LandPlants) Phylogenetic Tree(s): OG_02_0002023_tree ,
OG_03_0007551 (SeedPlants) Phylogenetic Tree(s): OG_03_0007551_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00189p00041140
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
AT1G11720 ATSS3, SS3 starch synthase 3 0.03 Archaeplastida
Cre06.g282000 No alias Carbohydrate metabolism.starch... 0.03 Archaeplastida
Cre12.g521700 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Archaeplastida
Cre16.g665800 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 Archaeplastida
Cre17.g721500 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
GSVIVT01012723001 No alias Carbohydrate metabolism.starch... 0.04 Archaeplastida
MA_482181g0010 No alias Soluble starch synthase 1, chloroplastic/amyloplastic... 0.03 Archaeplastida
Mp2g08030.1 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 Archaeplastida
Mp3g25350.1 No alias starch synthase (SSI) 0.02 Archaeplastida
Solyc02g071040.3.1 No alias starch synthase (SSIV) 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 512 751
IPR001296 Glyco_trans_1 805 960
No external refs found!