MA_138036g0010


Description : subfamily ABCC transporter


Gene families : OG_01_0000058 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000058_tree ,
OG_02_0000437 (LandPlants) Phylogenetic Tree(s): OG_02_0000437_tree ,
OG_03_0000372 (SeedPlants) Phylogenetic Tree(s): OG_03_0000372_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_138036g0010
Cluster HCCA: Cluster_344

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00219490 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00065p00212850 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Cre02.g103250 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01021595001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01037789001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Gb_05522 No alias subfamily ABCC transporter 0.02 Archaeplastida
LOC_Os11g05700.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
Mp2g22040.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Mp4g15590.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Mp5g03370.1 No alias ABC transporter C family member 2 OS=Arabidopsis... 0.02 Archaeplastida
Mp5g13220.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
Pp3c21_7530V3.1 No alias multidrug resistance-associated protein 5 0.01 Archaeplastida
Smo165716 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo230611 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo409191 No alias Solute transport.primary active transport.ABC... 0.06 Archaeplastida
Solyc07g065320.4.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Solyc08g006880.3.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
Solyc10g024420.3.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
Zm00001e000347_P001 No alias subfamily ABCC transporter 0.02 Archaeplastida
Zm00001e034301_P001 No alias subfamily ABCC transporter 0.03 Archaeplastida
Zm00001e038918_P002 No alias subfamily ABCC transporter 0.03 Archaeplastida
AMTR_s00149p00037740 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 LandPlants
GSVIVT01018403001 No alias Solute transport.primary active transport.ABC... 0.02 LandPlants
GSVIVT01037789001 No alias Solute transport.primary active transport.ABC... 0.02 LandPlants
Gb_05522 No alias subfamily ABCC transporter 0.02 LandPlants
Zm00001e000347_P001 No alias subfamily ABCC transporter 0.02 LandPlants
Zm00001e034301_P001 No alias subfamily ABCC transporter 0.03 LandPlants
GSVIVT01037789001 No alias Solute transport.primary active transport.ABC... 0.02 SeedPlants
Gb_05522 No alias subfamily ABCC transporter 0.02 SeedPlants
Zm00001e034301_P001 No alias subfamily ABCC transporter 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1204 1295
IPR011527 ABC1_TM_dom 304 571
IPR011527 ABC1_TM_dom 932 1029
IPR003439 ABC_transporter-like 636 770
No external refs found!