MA_137810g0010


Description : Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana (sp|q9lmy5|ppr41_arath : 401.0)


Gene families : OG_01_0011533 (Archaeplastida) Phylogenetic Tree(s): OG_01_0011533_tree ,
OG_02_0011433 (LandPlants) Phylogenetic Tree(s): OG_02_0011433_tree ,
OG_03_0011536 (SeedPlants) Phylogenetic Tree(s): OG_03_0011536_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_137810g0010
Cluster HCCA: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
AT1G13630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
LOC_Os10g33874.1 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
AT1G13630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 LandPlants
GSVIVT01010112001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 LandPlants
LOC_Os10g33874.1 No alias Putative pentatricopeptide repeat-containing protein... 0.04 LandPlants
LOC_Os10g33874.1 No alias Putative pentatricopeptide repeat-containing protein... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 495 524
IPR002885 Pentatricopeptide_repeat 152 177
IPR002885 Pentatricopeptide_repeat 382 415
IPR002885 Pentatricopeptide_repeat 592 624
IPR002885 Pentatricopeptide_repeat 208 240
IPR002885 Pentatricopeptide_repeat 246 295
IPR002885 Pentatricopeptide_repeat 316 365
IPR002885 Pentatricopeptide_repeat 526 575
IPR002885 Pentatricopeptide_repeat 631 680
IPR002885 Pentatricopeptide_repeat 422 469
No external refs found!