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  5. MA_137427g0010

MA_137427g0010


Description : C3H zinc finger transcription factor


Gene families : OG_01_0000421 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000421_tree ,
OG_02_0000820 (LandPlants) Phylogenetic Tree(s): OG_02_0000820_tree ,
OG_03_0002308 (SeedPlants) Phylogenetic Tree(s): OG_03_0002308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_137427g0010
Cluster HCCA: Cluster_487

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019118001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 Archaeplastida
GSVIVT01019119001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 Archaeplastida
Gb_02527 No alias C3H zinc finger transcription factor 0.04 Archaeplastida
Mp2g10620.1 No alias C3H zinc finger transcription factor 0.02 Archaeplastida
Pp3c26_12270V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.05 Archaeplastida
Pp3c26_12400V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 Archaeplastida
Pp3c4_29750V3.1 No alias zinc finger protein 1 0.04 Archaeplastida
Zm00001e039538_P001 No alias C3H zinc finger transcription factor 0.02 Archaeplastida
GSVIVT01019118001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 LandPlants
GSVIVT01019119001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 LandPlants
Gb_02527 No alias C3H zinc finger transcription factor 0.04 LandPlants
LOC_Os12g21700.1 No alias C3H zinc finger transcription factor 0.02 LandPlants
Mp2g10620.1 No alias C3H zinc finger transcription factor 0.02 LandPlants
Pp3c26_12270V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 LandPlants
Pp3c26_12400V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 LandPlants
Pp3c4_29750V3.1 No alias zinc finger protein 1 0.04 LandPlants
GSVIVT01019119001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 SeedPlants
Gb_02527 No alias C3H zinc finger transcription factor 0.04 SeedPlants
LOC_Os12g21700.1 No alias C3H zinc finger transcription factor 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 337 362
IPR000571 Znf_CCCH 384 408
IPR000571 Znf_CCCH 121 145
IPR000571 Znf_CCCH 75 100
IPR000571 Znf_CCCH 167 191
No external refs found!