1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g20260

Ehy_g20260


Description : scaffold component *(GANP/SAC3) of TREX-2 mRNP trafficking complex & original description: none


Gene families : OG0002923 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002923_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g20260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00182220 evm_27.TU.AmTr_v1... RNA processing.messenger ribonucleoprotein particle... 0.05 OrthoFinder output from all 47 species
AT2G39340 No alias SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0.03 OrthoFinder output from all 47 species
Adi_g017393 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.03 OrthoFinder output from all 47 species
Adi_g051366 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.05 OrthoFinder output from all 47 species
Ala_g09029 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.08 OrthoFinder output from all 47 species
Als_g15826 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.03 OrthoFinder output from all 47 species
Aob_g23000 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.03 OrthoFinder output from all 47 species
Ceric.10G090000.1 Ceric.10G090000 scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020816.8 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 OrthoFinder output from all 47 species
Dcu_g05785 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.03 OrthoFinder output from all 47 species
GSVIVT01032627001 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 OrthoFinder output from all 47 species
LOC_Os01g61930.1 LOC_Os01g61930 scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.05 OrthoFinder output from all 47 species
MA_39508g0010 No alias scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.02 OrthoFinder output from all 47 species
Mp8g06380.1 No alias scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.02 OrthoFinder output from all 47 species
Nbi_g02438 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.03 OrthoFinder output from all 47 species
Ppi_g15724 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012464 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.03 OrthoFinder output from all 47 species
Spa_g10500 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.06 OrthoFinder output from all 47 species
Zm00001e027254_P001 Zm00001e027254 scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.05 OrthoFinder output from all 47 species
Zm00001e031846_P004 Zm00001e031846 scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR005062 SAC3/GANP/THP3_conserved 767 890
No external refs found!