GSVIVT01010362001


Description : 27.1.2 RNA.processing.RNA helicase RNA helicase family protein


Gene families : OG_01_0000259 (Gene family) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01010362001
Cluster HCCA cluster: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AT3G62310 No alias RNA helicase family protein 0.04 Gene family
Cpa|evm.model.tig00000796.23 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.02 Gene family
MA_277016g0010 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family
Smo82212 PACid_15409607 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family
Solyc01g079250.3.1 Solyc01g079250.3 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.03 Gene family
Solyc09g097820.3.1 Solyc09g097820.3 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.04 Gene family
Zm00001d028923 GRMZM2G385931 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
Zm00001d039380 GRMZM2G305060 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
Zm00001d049980 GRMZM2G121776 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 404 514
IPR011709 DUF1605 563 644
IPR011545 DEAD/DEAH_box_helicase_dom 11 167
IPR001650 Helicase_C 208 339
No external refs found!