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  5. Adi_g124963

Adi_g124963


Description : component *(uS17) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0004111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g124963
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Adi_g094879 No alias component *(uS17) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Nbi_g32977 No alias component *(uS17) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g20449 No alias component *(uS17) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g44826 No alias component *(uS17) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Ppi_g48617 No alias component *(uS17) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g05400 No alias component *(uS17) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070037 rRNA (pseudouridine) methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!