GSVIVT01009974001


Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01009974001
Cluster HCCA cluster: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g10800 Os01g0205200 No description available 0.02 Gene family
MA_10157572g0010 No alias No description available 0.03 Gene family
MA_122899g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_140591g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_184088g0010 No alias No description available 0.02 Gene family
MA_20782g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_75133g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_77437g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Smo113567 PACid_15417087 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Smo93321 PACid_15420548 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 102 124
IPR002885 Pentatricopeptide_repeat 128 157
IPR002885 Pentatricopeptide_repeat 635 658
IPR002885 Pentatricopeptide_repeat 228 258
IPR002885 Pentatricopeptide_repeat 462 488
IPR002885 Pentatricopeptide_repeat 535 558
IPR002885 Pentatricopeptide_repeat 301 321
IPR002885 Pentatricopeptide_repeat 329 358
IPR002885 Pentatricopeptide_repeat 360 387
IPR002885 Pentatricopeptide_repeat 560 606
IPR033753 GCV_H/Fam206 814 909
No external refs found!