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  5. Adi_g122229

Adi_g122229


Description : not classified & original description: none


Gene families : OG0002077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g122229
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
AT5G07090 No alias Ribosomal protein S4 (RPS4A) family protein 0.05 OrthoFinder output from all 47 species
Adi_g129583 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g02046 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000501 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0091.g042854 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021433.38 No alias 40S ribosomal protein S4 OS=Oryza sativa subsp. japonica 0.05 OrthoFinder output from all 47 species
Dcu_g18005 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01024668001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01030295001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os01g25610.1 LOC_Os01g25610 component RPS4 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os02g01560.1 LOC_Os02g01560 component RPS4 of SSU proteome 0.02 OrthoFinder output from all 47 species
LOC_Os05g30530.1 LOC_Os05g30530 component RPS4 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp8g03280.1 No alias component RPS4 of SSU proteome 0.03 OrthoFinder output from all 47 species
Msp_g12425 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ore_g42187 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Pp3c1_8290V3.1 Pp3c1_8290 Ribosomal protein S4 (RPS4A) family protein 0.03 OrthoFinder output from all 47 species
Pp3c25_3736V3.1 Pp3c25_3736 Ribosomal protein S4 (RPS4A) family protein 0.03 OrthoFinder output from all 47 species
Solyc02g070330.4.1 Solyc02g070330 component RPS4 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g44321 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Tin_g02542 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e006307_P001 Zm00001e006307 component RPS4 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e011676_P001 Zm00001e011676 component RPS4 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013845 Ribosomal_S4e_central_region 22 96
IPR032277 40S_S4_C 139 186
No external refs found!