AMTR_s00185p00050380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00185.20

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor


Gene families : OG_01_0000167 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000167_tree ,
OG_02_0000303 (LandPlants) Phylogenetic Tree(s): OG_02_0000303_tree ,
OG_03_0002287 (SeedPlants) Phylogenetic Tree(s): OG_03_0002287_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00185p00050380
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010836001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.03 Archaeplastida
LOC_Os04g41820.1 No alias transcription factor (bZIP) 0.02 Archaeplastida
GSVIVT01010836001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.03 LandPlants
GSVIVT01032683001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.02 LandPlants
LOC_Os04g41820.1 No alias transcription factor (bZIP) 0.02 LandPlants
LOC_Os12g06520.1 No alias transcription factor (bZIP) 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004827 bZIP 427 485
No external refs found!