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  5. Ehy_g19882

Ehy_g19882 (ATMBD9, MBD9)


Aliases : ATMBD9, MBD9

Description : component *(MBD9) of SWR1 chromatin remodeling complex & original description: none


Gene families : OG0006711 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006711_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g19882

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267510 ATMBD9, MBD9,... Methyl-CpG-binding domain-containing protein 9... 0.03 OrthoFinder output from all 47 species
AT3G01460 ATMBD9, MBD9 methyl-CPG-binding domain 9 0.03 OrthoFinder output from all 47 species
Adi_g011991 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Ala_g17040 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.06 OrthoFinder output from all 47 species
Als_g03908 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.06 OrthoFinder output from all 47 species
Aspi01Gene65658.t1 ATMBD9, MBD9,... component *(MBD9) of SWR1 chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Cba_g07789 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Ceric.19G068300.1 ATMBD9, MBD9,... component *(MBD9) of SWR1 chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Dcu_g37526 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.08 OrthoFinder output from all 47 species
Dde_g09867 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01020232001 ATMBD9, MBD9 Methyl-CpG-binding domain-containing protein 9... 0.04 OrthoFinder output from all 47 species
Gb_22434 ATMBD9, MBD9 Methyl-CpG-binding domain-containing protein 9... 0.03 OrthoFinder output from all 47 species
Len_g47194 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
MA_41907g0010 ATMBD9, MBD9 Methyl-CpG-binding domain-containing protein 9... 0.03 OrthoFinder output from all 47 species
MA_41907g0020 ATMBD9, MBD9 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp8g01420.1 ATMBD9, MBD9 Methyl-CpG-binding domain-containing protein 9... 0.03 OrthoFinder output from all 47 species
Nbi_g06340 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Ppi_g08937 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013974 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Sam_g18047 No alias component *(MBD9) of SWR1 chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Solyc05g005640.4.1 ATMBD9, MBD9,... Methyl-CpG-binding domain-containing protein 9... 0.06 OrthoFinder output from all 47 species
Spa_g49760 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Tin_g01305 ATMBD9, MBD9 component *(MBD9) of SWR1 chromaTin remodeling complex &... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR028941 WHIM2_dom 1706 1802
IPR028942 WHIM1_dom 1520 1550
IPR018501 DDT_dom 940 1039
IPR001739 Methyl_CpG_DNA-bd 509 556
IPR019787 Znf_PHD-finger 1433 1479
IPR019787 Znf_PHD-finger 118 165
No external refs found!